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BioCarta canonical pathways biocarta
Canonical Pathways Biocarta, supplied by BioCarta, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/canonical+pathways+biocarta/canonical+pathways+biocarta/pm40639772-76-12-17
Average 90 stars, based on 1 article reviews
canonical pathways biocarta - by Bioz Stars, 2026-09
90/100 stars

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Article Title: Spatiotemporal Multi-Omics Mapping Generates a Molecular Atlas of the Aortic Valve and Reveals Networks Driving Disease
Article Snippet: For the pathway enrichment analysis (pathway data retrieved from http://consensuspathdb.org/ in February 2017), the canonical pathways from KEGG, Biocarta, and Reactome were considered12.

Article Title: MUC16 mutations improve patients’ prognosis by enhancing the infiltration and antitumor immunity of cytotoxic T lymphocytes in the endometrial cancer microenvironment
Article Snippet: MUC16 mutations are involved in cytotoxic immune cell mediated antitumor responses. (A)-(C) GSEA using the canonical pathways, which are annotated pathways mainly from BIOCARTA, KEGG and REACTOME databases, as the gene sets in the analysis.

Article Title: REPA: Applying Pathway Analysis to Genome-Wide Transcription Factor Binding Data
Article Snippet: Pathway analysis has been extensively applied to aid in the interpretation of the results of genome-wide transcription profiling studies, and has been shown to successfully find associations between the biological phenomena under study and biological pathways.. There are two widely used approaches of pathway analysis: over-representation analysis, and gene set analysis.. Recently genome-wide transcription factor binding data has become widely available allowing for the application of pathway analysis to this type of data.

Article Title: An RNA-Seq atlas of gene expression in mouse and rat normal tissues
Article Snippet: Gene set enrichment at MSigDB (GSE) using canonical pathways from BIOCARTA, KEGG, and REACTOME revealed a highly significant enrichment of genes involved in transcript splicing and RNA processing (FDR<10 −15 ) as well as neuronal genes (FDR<10 −7 ) and genes involved in the immune system (FDR<10 −7 ).

Article Title: Fatty acid binding protein 1 (FABP1) depletion promotes an oxidative metabolic shift in Caco-2 colorectal cancer cells.
Article Snippet: Lipid metabolism reprogramming is a well-established hallmark of many cancer types, including colorectal cancer (CRC).. Nevertheless, a clear understanding on how fatty acid (FA) metabolism is fine-tuned during CRC development and progression is still missing.. Given that CRC is the second leading cause of cancer-related death, addressing these critical aspects may provide the rationale for new therapeutic approaches and early biomarker identification.

Article Title: Cholesterol and matrisome pathways dysregulated in astrocytes and microglia.
Article Snippet: Article Cholesterol and matrisome pathways dysregulated in astrocytes and microglia

Gene Expression:

Article Title: Discovery of novel drug sensitivities in T-PLL by high-throughput ex vivo drug testing and mutation profiling.
Article Snippet: E I Andersson, S Pützer, B Yadav, O Dufva, S Khan, L He, L Sellner, A Schrader, G Crispatzu, M Oleś, H Zhang, S Adnan, S Lagström, D Bellanger, J P Mpindi, S Eldfors, T Pemovska, P Pietarinen, A Lauhio, K Tomska, C Cuesta-Mateos, E Faber, S Koschmieder, T H Brümmendorf, S Kytölä, E-R Savolainen, T Siitonen, P Ellonen, O Kallioniemi, K Wennerberg, W Ding, M-H Stern, W Huber, S Anders, J Tang, T Aittokallio, T Zenz, M Herling, S Mustjoki

Mutagenesis:

Article Title: MUC16 mutations improve patients’ prognosis by enhancing the infiltration and antitumor immunity of cytotoxic T lymphocytes in the endometrial cancer microenvironment
Article Snippet: .. MUC16 mutations are involved in cytotoxic immune cell mediated antitumor responses To guide our identification of immune pathways necessary for mutant MUC16 function, we performed GSEA using canonical pathways mainly from BIOCARTA, KEGG and REACTOME databases as the gene sets. ..



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